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Vol 22, No 1 (2025)

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Original studies

Artificial intelligence tools for phenotyping patients with anaphylaxis

Nikitina E.A., Dushkin A.D., Lebedkina M.S., Mukhina O.A., Kruglova T.S., Andreev S.S., Nurtazina A.Y., Leonova E.S., Volkova P.A., Pampura A.N., Karaulov A.V., Lysenko M.A., Fomina D.S.

Abstract

BACKGROUND: Anaphylaxis is the most severe manifestation of immediate systemic hypersensitivity reactions. In recent years, there has been an increase in the number of reported cases of anaphylaxis. Given the variety of clinical manifestations behind the diagnosis of “anaphylaxis”, one of the most urgent issues at present is the task of phenotyping and endotyping of patients with this life-threatening pathology as part of implementation of the individual approach, both during treatment in the acute period and diagnosis in the period of recovery.

AIM: To find the main clinical phenotypes of patients with immediate hypersensitivity reactions, which will further allow stratifying patients by risk groups bringing therapeutic and diagnostic algorithms to the modern level of personalized medicine.

MATERIALS AND METHODS: The study was conducted based on retrospective stepwise analysis of patient medical record data from 2019 to 2022. To identify relatively homogeneous groups of patients based on clinical, agglomerative clustering was performed on 56 variables followed by 2 principal component extraction using the dimensionality reduction method with t-distributed stochastic neighbor embedding. Agglomerative clustering divided patients into 4 major clinical phenotypes, and each patient was assigned a corresponding phenotype.

RESULTS: Based on this analysis, 4 phenotypes of patients with severe immediate-type hypersensitivity reactions were identified.

CONCLUSION: A new classification based on the use of phenotypes, endotypes and biomarkers is currently being developed to broaden our understanding of anaphylactic reactions. Given the limitations of the study (patients were not subjected to additional examinations in the current study), it is not possible to reliably identify endophenotypic differences in different clusters. Additional studies are needed to identify the correlation between anaphylactic reaction phenotypes and its pathophysiological mechanisms of development.

Russian Journal of Allergy. 2025;22(1):1-10
pages 1-10 views

T-cell immune response to SARS-CoV-2 in healthcare workers 2.5–3 years after COVID-19

Reshetnikova I.D., Tyurin Y.A., Fassakhov R.S., Agafonova E.V.

Abstract

BACKGROUND: The T cell adaptive immune response is an important factor in the formation of antiviral defense against SARS-CoV-2.

AIM: Тo study T cell immunity to the SARS-CoV-2 in healthcare workers of a temporary infectious diseases hospital in Kazan — COVID-19 convalescents 2.5–3 years after the infection using the IGRA-ELISPOT technology.

MATERIALS AND METHODS: The immune response to the most SARS-CoV-2 immunogenic peptides S, N, ORF-3a, ORF-7a was studied in 91 healthcare workers of the city of Kazan 2.5–3 years after suffering from COVID-19 of varying severity and varying vaccine status. The results were recorded by the number of formed spots: imprints of one T cell secreting interferon γ in response to antigenic stimulation. The number of obtained spots characterized the content of peripheral blood CD4+ and CD8+ T cells specific for SARS-CoV-2 antigens and made it possible to assess individual immune response. Statistical processing wasperformed using variation statistics methods using the statistical package Excel 2016 and WinPepi Version 11, 65. The relative frequency of a trait (P) and the error in the relative frequency value (m) were calculated. The study results were compared using the χ2-test when the number of observations was more than 5 and Fisher’s exact method when the number of observations was 5 or less. Differences were considered significant at p <0.05.

RESULTS: 2.5–3 years after experiencing COVID-19 infection, T-cell immune response to S protein peptides is recorded in 72.53 ± 5.50 %, and to structural peptides N, M, ORF3a and ORF7a in 86.81 ± 3.81 % (χ2-test 5.733; p = 0.017) of medical workers. A higher level of T cell immunity to S protein peptides of the SARS-CoV-2 virus is observed in healthcare workers who have had moderate/severe COVID-19. The preservation of the parameters of hybrid immunity compared to post-infectious immunity is higher, which is significant both for groups with a history of clinical manifestations of COVID-19 and for the group with asymptomatic forms.

CONCLUSION: Our empirically established ranking of the number of spots in classes can be used to assess individual cellular immunity and stratify the risks of re-infection in healthcare workers. A negative result of the T cell immune response to the spike S protein antigen may be the basis for deciding whether to re-vaccinate healthcare workers.

Russian Journal of Allergy. 2025;22(1):11-22
pages 11-22 views

Reviews

Treatment of eosinophilic esophagitis: literature review and own clinical observations

Kaibysheva V.O., Fedorov E.D., Shapovalyants S.G.

Abstract

Eosinophilic esophagitis is a T2 disease characterized by eosinophilic infiltration of the esophageal mucosa, subepithelial and submucosal fibrosis, and progressive dysphagia. Early diagnosis and appropriate treatment of eosinophilic esophagitis can prevent the development of strictures and other complications. The treatment of eosinophilic esophagitis includes the use of elimination diets, pharmacological therapy, and endoscopic dilation or bougienage of the esophageal strictures. The most effective drugs for achieving clinical and histological remission in eosinophilic esophagitis are proton pump inhibitors, topical glucocorticosteroids, and biological agents represented by monoclonal antibodies. Over time, the advantages of systemic monoclonal antibody therapies (anti-interleukin 4/13) over proton pump inhibitors and topical glucocorticosteroids have become evident, particularly in terms of their impact on mucosal inflammation and on remodeling of the esophageal wall. Currently, the only approved anti-interleukin drug for eosinophilic esophagitis is dupilumab, which has demonstrated high efficacy and safety in clinical trials and is approved for use in children aged 1 year and older, as well as in adults. Endoscopic dilation or bougienage is performed in patients with eosinophilic esophagitis who have esophageal strictures and stenosis (with an esophageal diameter <13 mm) following a course of pharmacotherapy. To this day, numerous questions remain regarding maintenance therapy, its duration, and predictors of disease progression. With the emergence of new biologic therapies for eosinophilic esophagitis, their accessibility, long-term efficacy, and safety have become critically important considerations.

The article systemizes existing data on the treatment strategies for patients with eosinophilic esophagitis.

Russian Journal of Allergy. 2025;22(1):23-43
pages 23-43 views

Panallergens: properties and clinical significance

Petrova S.Y., Khlgatyan S.V., Berzhets V.M., Nesterenko L.N., Alatortseva G.I., Emelyanova O.Y.

Abstract

The search for causally significant allergens remains a difficult task despite the successful development of molecular allergy diagnostics. Most patients have reactions when they come into contact with several sources of allergens. One of the reasons for polysensitization may be cross-reactivity, in which specific IgE antibodies against one allergen can bind homologous molecules of another allergen. This means that polysensitization, which is observed at first glance during an allergologic examination, may actually be an allergy to only one type of protein (panallergen). In this case, it is possible to carry out allergen-specific immunotherapy with just one allergen or even one protein (panallergen).

This review describes various families of plant and animal origin panallergens, their properties, functions and possible consequences of sensitization of patients with allergies. The review also provides a summary table of protein families of panallergens. Conducting population-based studies and screening of patients with atopy will contribute to gaining new knowledge about panallegens, their contribution to disease manifestations, and the development of effective diagnostic and therapeutic approaches.

Russian Journal of Allergy. 2025;22(1):44-57
pages 44-57 views

The role of exposome-specific risk factors in atopic dermatitis

Macharadze D.S., Ruzhentsova T.A., Janaeva H.A., Meshkova N.A., Malyshev V.S.

Abstract

The article provides an overview of the latest concepts regarding the role of specific exposomal factors in atopic dermatitis in children and adults. As is known, specific factors include: air pollutants (external, internal), air humidity, metals, water hardness, detergents, pollen and other allergen, diet, human lifestyle factors. In this work, the main attention is paid to all the above factors, except for the role of allergy in the etiopathogenesis of atopic dermatitis (a separate publication will be devoted to this issue). Based on the data of systematic reviews, meta-analyses and recent studies, the role of specific factors is analyzed: air pollutants (external and indoor), diet for pregnant women and during lactation; various dietary supplements, etc. — in the development of atopic dermatitis. It is shown that these (and other exposomal) factors can also participate in the worsening of clinical manifestations of atopic dermatitis (for example, detergents). However, the leading role of any specific factor (factors) in the etiopathogenesis of atopic dermatitis (including allergies) has not been reliably proven to date. This also applies to nutritional factors (for example, adherence to a hypoallergenic diet by the mother during pregnancy and lactation, use of vitamin D and probiotics in the pre- and postnatal periods, etc.). In all likelihood, the external exposome is involved as a risk factor in the development of atopic dermatitis and worsening of the severity of the disease. Nevertheless, measures aimed at improving environmental factors can only be useful, especially in combination with anti-inflammatory drugs.

Russian Journal of Allergy. 2025;22(1):58-66
pages 58-66 views

Case reports

Recurrent angioedema with normal C1-inhibitor: genetics determine the endotype

Lebedkina M.S., Fomina D.S., Bobrikova E.N., Yukhnovskaya Y.D., Roppelt A.A., Kruglova T.S., Mukhina O.A., Mаrkina U.A., Nikitina E.A., Alekseeva Y.G., Karaulov A.V., Lysenko M.A.

Abstract

Hereditary angioedema with normal C1 esterase inhibitor is a rare genetic disorder characterized by periodical and unpredictable angioedema without quantitative and qualitative deficiency of C1-inhibitor. According to the modern classification, this disease can present as two different endotypes: bradykinin-mediated and endothelium dysfunction-associated. Diagnosis of this disease is complicated by the need to perform genetic screening because available laboratory tests (C1-inhibitor, its functionality, and C4 protein in blood plasma) are within normal values, functional molecular tests are not available, clinical data are limited to few cohorts and, for some genetic defects, to single clinical observations. Genetic examination of patients with recurrent angioedema expands the cohort of patients with hereditary angioedema and normal C1 esterase inhibitor.

The article describes 17 patients with hereditary angioedema with normal C1 esterase inhibitor who underwent treatment at a specialized center in Moscow. The bradykinin-mediated angioedema endotype was found in 13 patients (9 with mutation in PLG, 2 with mutation in FXII, and 2 with mutation in KNG1), and endothelium dysfunction-associated angioedema was diagnosed in 4 patients with mutation in MYOF (2 asymptomatic carriers). Currently, data on the clinical presentation, diagnosis, and therapy of patients are limited to single clinical cases and small clinical case series, thus further data collection is needed.

The publication contains unique data on the algorithm of diagnosis and selection of therapy in patients with angioedema and normal C1-inhibitor level.

Russian Journal of Allergy. 2025;22(1):67-85
pages 67-85 views

Use of an extract from a culture of thermophilic strain Staphylococcus aureusin the complex therapy of a patient with atopic dermatitis: a clinical case

Smolnikov E.V., Sklyarova V.O., Shtyrbul T.I., Litovkina A.O., Shtyrbul O.V., Elisyutina O.G., Fedenko E.S.

Abstract

Atopic dermatitis refers to type 2 inflammatory disease. It is associated with genetic predisposition to allergies, immune dysregulation, skin barrier dysfunction and characterized by chronic relapsing course. Activation of T2 inflammation in atopic dermatitis is a complex interaction between innate and adaptive immune mechanisms, epidermal cells, nervous system, and microbial factors, leads to the development of local and systemic inflammation, characterized by activation and proliferation of type 2 T-helper cells, group 2 innate lymphoid cells, and the involvement of pro-inflammatory type 2 cytokines. Understanding these processes opens opportunities for targeted biological therapy and selective immunosuppressive therapy aimed at blocking key cytokines of T2 inflammation. Agents with non-specific action affecting immune dysregulation in allergic diseases are also being introduced into clinical practice. They are presented by specific natural or recombinant regulatory peptides and proteins. One of such drugs is a pharmaceutical product with an extract from thermophilic strain Staphylococcus aureus culture as an active substance.

The article presents a clinical case of an adult patient with severe atopic dermatitis complicated by bacterial infection with positive response to use a drug, based on an extract from thermophilic strain Staphylococcus aureus culture.

Russian Journal of Allergy. 2025;22(1):86-94
pages 86-94 views

Interdisciplinary approach to diagnosis and treatment of primary immunodeficiency

Luntsov A.V., Latysheva E.A., Skorokhodkina O.V., Valeeva A.R., Dvoeglazova N.I.

Abstract

The article describes a clinical case of a patient with primary immunodeficiency. Initially, the patient presented symptoms of febrile temperature, recurrent respiratory infections, hematological changes in the form of anemia, neutropenia, thrombocytopenia, elevated liver transaminases, episodes of nose bleeds and was observed by an infectious disease doctor.

When lymphadenopathy was revealed, the patient was referred to an oncologist and diagnosed with follicular lymphoma. Splenectomy was performed and 1 course of chemotherapy was administered resulting in stabilization of the patient’s condition for 6 months. Dynamic observation of lymph node biopsies at a federal hematological center ruled out the diagnosis of follicular lymphoma. Concurrently, hypergammaglobulinemia was diagnosed, lymphadenopathy persisted, and the patient was referred to an immunologist. The patient underwent molecular genetic testing, and mutations in STAT3 and RIPK1 genes were detected with undetermined clinical significance. The patient was diagnosed with primary immunodeficiency with immune dysregulation, lymphoproliferative and autoinflammatory syndromes. The patient was kept under observation of an immunologist and a hematologist, was regularly examined by a gastroenterologist and a rheumatologist. The patient received immunosuppressive rituximab therapy and filgrastim for severe neutropenia, was administered preventive antibiotics, antifungal medications, antiviral medications after diagnosis of cytomegalovirus and Epstein–Barr virus. Additionally, plasmapheresis was performed several times. The patient received consultations at the leading immunological, hematological, rheumatological centers. He was also administered anticytokine therapy with an anti-interleukin-1 monoclonal antibody with no significant clinical effect.

Due to insignificant clinical effect during rituximab therapy, the patient was prescribed ruxolitinib. This treatment resulted in normal neutrophil count, decreased intensity of fever, rare episodes of nasal bleeding and ulcerative stomatitis but lymphoproliferation syndrome persisted. In addition, the patient developed pain and swelling in the joints so low-dose oral prednisolone was also prescribed in combination with ruxolitinib. This treatment resulted in improvement of clinical and laboratory parameters of the patient.

This clinical case demonstrates the complexity of diagnosis and treatment of a patient with primary immunodeficiency, the necessity of interdisciplinary approach in management of such patients.

Russian Journal of Allergy. 2025;22(1):95-106
pages 95-106 views

Possibilities of achieving control of allergic rhinitis in a patient with skin sensitization and continued contact with pets

Kulichenko D.S., Pavlova K.S., Kurbacheva O.M.

Abstract

Skin sensitization is becoming an increasingly common pathology among year-round allergies, and its clinical manifestations vary in patients from the discomfort caused by rhinoconjunctivitis to severe bronchial asthma which can have a huge negative impact on the patient’s quality of life. One of the important recommendations when identifying sensitization to epidermal allergens is complete elimination, but in routine practice this recommendation is not followed in most cases due to the inability to part with the animal. Thus, exposure to the allergen persists and the symptoms continue to bother and progress.

The article presents a clinical case of achieving control of allergic rhinitis in a patient with skin sensitization and ongoing contact with pets demonstrating successful experience with the use of a fixed combination of olopatadine and mometasone over a long period of observation.

Russian Journal of Allergy. 2025;22(1):107-114
pages 107-114 views

Monitoring of seasonal skin sensitivity to apple and IgE reactivity to birch pollen allergen Bet v 1 and apple allergen Mal d 1, in patients with birch pollen allergy

Litovkina A.O., Smolnikov E.V., Fedenko E.S.

Abstract

Birch pollen allergy is widespread globally and ranks among the leading allergic diseases in Russia. Cross-reactive food allergy, often observed in patients with birch pollen allergy, is an underestimated issue that exacerbates the course of pollinosis. The presence of cross-reactive food allergy significantly impacts the quality of life of patients with pollinosis. Unlike reactions to pollen, reactions to plant foods can occur year-round and may sometimes have severe, even life-threatening manifestations (e.g., angioedema of the lips and tongue, laryngeal edema, urticaria, anaphylaxis). In many patients, сross-reactive food allergy symptoms first appear during or immediately after the pollen season. According to existing scientific data, this may be due to an increase in the levels of specific immunoglobulin E during the flowering season, both to the causative pollen allergens and to cross-reacting food allergens.

The article presents two clinical cases of development of oral allergy syndrome after consuming raw apple during the birch flowering season, demonstrating possible differences in the mechanisms of cross-reactive food allergy to apple in patients sensitized to birch pollen allergen.

Russian Journal of Allergy. 2025;22(1):115-121
pages 115-121 views

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